| α-Acetolactate decarboxylaseEC 4.1.1.5 | Bacillus amyloliquefaciensBacillus subtilisBacillus subtilis, containing the gene for α–Acetolactate decarboxylase isolated from Bacillus brevis |
| AminopeptidaseEC 3.4.11.1 | Aspergillus oryzaeLactococcus lactis |
| α-AmylaseEC 3.2.1.1 | Aspergillus nigerAspergillus oryzaeBacillus amyloliquefaciensBacillus licheniformisBacillus licheniformis, containing the gene for α-Amylase isolated from Geobacillus stearothermophilusBacillus subtilisBacillus subtilis, containing the gene for α-Amylase isolatedfrom Geobacillus stearothermophilusGeobacillus stearothermophilus |
| β-AmylaseEC 3.2.1.2 | Bacillus amyloliquefaciensBacillus subtilis |
| AmylomaltaseEC 2.4.1.25 | Bacillus amyloliquefaciens, containing the gene for amylomaltase derived from Thermus thermophilus |
| α–ArabinofuranosidaseEC 3.2.1.55 | Aspergillus niger |
| AsparaginaseEC 3.5.1.1 | Aspergillus nigerAspergillus oryzae |
| Aspergillopepsin IEC 3.4.23.18 | Aspergillus nigerAspergillus oryzae |
| Aspergillopepsin IIEC 3.4.23.19 | Aspergillus niger |
| CarboxylesteraseEC 3.1.1.1 | Rhizomucor miehei |
| CatalaseEC 1.11.1.6 | Aspergillus nigerMicrococcus luteus |
| CellulaseEC 3.2.1.4 | Aspergillus nigerPenicillium funiculosumTrichoderma reeseiTrichoderma viride |
| ChymosinEC 3.4.23.4 | Aspergillus nigerEscherichia coli K-12 strain GE81Kluyveromyces lactis |
| ChymotrypsinEC 3.4.21.1 | Bacillus licheniformis, containing the gene for chymotrypsin isolated from Nocardiopsis prasina |
| Cyclodextrin glucanotransferaseEC 2.4.1.19 | Paenibacillus macerans |
| DextranaseEC 3.2.1.11 | Chaetomium gracilePenicillium lilacinum |
| Endo-1,4-beta-xylanaseEC 3.2.1.8 | Aspergillus nigerAspergillus oryzaeAspergillus oryzae, containing the gene for Endo-1,4-beta-xylanase isolated from Aspergillus aculeatusAspergillus oryzae, containing the gene for Endo-1,4-beta-xylanase isolated from Thermomyces lanuginosusBacillus amyloliquefaciensBacillus subtilisHumicola insolensTrichoderma reesei |
| Endo-1,4-beta-xylanase, protein-engineered variantEC 3.2.1.8 | Bacillus licheniformis, containing the gene for Endo-1,4-beta-xylanase isolated from Bacillus licheniformis |
| Endo-arabinaseEC 3.2.1.99 | Aspergillus niger |
| Endo-proteaseEC 3.4.21.26 | Aspergillus niger |
| β-FructofuranosidaseEC 3.2.1.26 | Aspergillus nigerSaccharomyces cerevisiae |
| α-GalactosidaseEC 3.2.1.22 | Aspergillus niger |
| β-GalactosidaseEC 3.2.1.23 | Aspergillus nigerAspergillus oryzaeBacillus circulans ATCC 31382Kluyveromyces marxianusKluyveromyces lactis |
| Glucan 1,3-β-glucosidaseEC 3.2.1.58 | Trichoderma harzianum |
| β-GlucanaseEC 3.2.1.6 | Aspergillus nigerAspergillus oryzaeBacillus amyloliquefaciensBacillus subtilisDisporotrichum dimorphosporumHumicola insolensTalaromyces emersoniiTrichoderma reesei |
| GlucoamylaseEC 3.2.1.3 | Aspergillus nigerAspergillus oryzaeRhizopus delemarRhizopus oryzaeRhizopus niveus |
| Glucose oxidaseEC 1.1.3.4 | Aspergillus nigerAspergillus oryzae, containing the gene for glucose oxidase isolated from Aspergillus niger |
| α-GlucosidaseEC 3.2.1.20 | Aspergillus oryzaeAspergillus niger |
| β-GlucosidaseEC 3.2.1.21 | Aspergillus niger |
| Glycerophospholipid cholesterol acyltransferase, protein engineered variantEC 2.3.1.43 | Bacillus licheniformis, containing the gene for glycerophospholipid cholesterol acyltransferase isolated from Aeromonas salmonicida subsp. salmonicida |
| Hemicellulase endo-1,3-β-xylanaseEC 3.2.1.32 | Humicola insolens |
| Hemicellulase multicomponent enzymeEC 3.2.1.78 | Aspergillus nigerBacillus amyloliquefaciensBacillus subtilisTrichoderma reesei |
| Hexose oxidaseEC 1.1.3.5 | Hansenula polymorpha, containing the gene for Hexose oxidase isolated from Chondrus crispus |
| InulinaseEC 3.2.1.7 | Aspergillus niger |
| Lipase, monoacylglycerolEC 3.1.1.23 | Penicillium camembertii |
| Lipase, triacylglycerolEC 3.1.1.3 | Aspergillus nigerAspergillus oryzaeAspergillus oryzae, containing the gene for Lipase, triacylglycerol isolated from Fusarium oxysporumAspergillus oryzae, containing the gene for Lipase, triacylglycerol isolated from Humicola lanuginosaAspergillus oryzae, containing the gene for Lipase, triacylglycerol isolated from Rhizomucor mieheiCandida rugosaHansenula polymorpha, containing the gene for Lipase, triacylglycerol isolated from Fusarium heterosporumMucor javanicusPenicillium roquefortiiRhizopus arrhizusRhizomucor mieheiRhizopus niveusRhizopus oryzae |
| Lipase, triacylglycerol, protein engineered variantEC 3.1.1.3 | Aspergillus niger, containing the gene for lipase, triacylglycerol isolated from Fusarium culmorum |
| LysophospholipaseEC 3.1.1.5 | Aspergillus niger |
| Maltogenic α-amylaseEC 3.2.1.133 | Bacillus subtilis containing the gene for maltogenic α-amylase isolated from Geobacillus stearothermophilus |
| Maltotetraohydrolase, protein engineered variantEC 3.2.1.60 | Bacillus licheniformis, containing the gene for maltotetraohydrolase isolated from Pseudomonas stutzeri |
| Metalloproteinase | Aspergillus oryzaeBacillus amyloliquefaciensBacillus coagulansBacillus subtilis |
| MucorpepsinEC 3.4.23.23 | Aspergillus oryzaeAspergillus oryzae, containing the gene for Aspartic proteinase isolated from Rhizomucor meiheiRhizomucor meiheiCryphonectria parasitica |
| Pectin lyaseEC 4.2.2.10 | Aspergillus niger |
| PectinesteraseEC 3.1.1.11 | Aspergillus nigerAspergillus oryzae, containing the gene for pectinesterase isolated from Aspergillus aculeatus |
| Phospholipase A1EC 3.1.1.32 | Aspergillus oryzae, containing the gene for phospholipase A1 isolated from Fusarium venenatum |
| Phospholipase A2EC 3.1.1.4 | Aspergillus niger, containing the gene isolated from porcine pancreasStreptomyces violaceoruber |
| 3-PhytaseEC 3.1.3.8 | Aspergillus niger |
| 4-PhytaseEC 3.1.3.26 | Aspergillus oryzae, containing the gene for 4-phytase isolated from Peniophora lycii |
| Polygalacturonase or Pectinase multicomponent enzymeEC 3.2.1.15 | Aspergillus nigerAspergillus oryzaeTrichoderma reesei |
| PullulanaseEC 3.2.1.41 | Bacillus acidopullulyticusBacillus amyloliquefaciensBacillus licheniformisBacillus subtilisBacillus subtilis, containing the gene for pullulanase isolated from Bacillus acidopullulyticusKlebsiella pneumoniae |
| Serine proteinaseEC 3.4.21.14 | Aspergillus oryzaeBacillus amyloliquefaciensBacillus haloduransBacillus licheniformisBacillus subtilis |
| TransglucosidaseEC 2.4.1.24 | Aspergillus niger |
| TransglutaminaseEC 2.3.2.13 | Streptomyces mobaraensis |
| TrypsinEC 3.4.21.4 | Fusarium venenatum, containing the gene for trypsin isolated from Fusarium oxysporum |
| UreaseEC 3.5.1.5 | Lactobacillus fermentum |
| Xylose isomeraseEC 5.3.1.5 | Actinoplanes missouriensisBacillus coagulansMicrobacterium arborescensStreptomyces olivaceusStreptomyces olivochromogenesStreptomyces murinusStreptomyces rubiginosus |