Overriding other Commonwealth laws. Section 6 note 2, reinforced by the empowering provisions, provides that this instrument must be complied with despite any other Commonwealth law. That means if another Act or instrument attempts to exempt an entity from registration or transfer duties, this direction prevails. This is a strong provision that may surprise officials who assume other laws take precedence.
Two separate transfer streams. The net amount formula in section 14 excludes import LCT and wine tax on customs dealings; those amounts are handled separately under section 19. This means an entity must manage two distinct transfer obligations for the same tax period. Missing one stream could cause accounting discrepancies.
No automatic reversal for input tax credits on imports. When an entity imports goods, it is notionally liable for GST on the importation under section 7, but it may also be entitled to an input tax credit for that importation. Under the net amount formula, the input tax credit is included in ITC and offsets the import GST in the ordinary net amount? Actually section 14’s definition of GST includes amounts on taxable importations, and ITC includes credits on creditable importations. So import GST and import ITC are both in the net amount formula. However, section 19 requires separate transfer of the import GST amount. But the net amount also includes that import GST, leading to potential double counting? Section 14(c) says LCT is “other than amounts notionally payable on taxable importations of luxury cars” and section 14(d) says WT is “other than amounts notionally payable on customs dealings”. So for wine tax and LCT on imports, the exclusion is explicit. For GST on imports, there is no exclusion; both the GST liability and the input tax credit appear in the net amount formula. But section 19 still requires transfer of the GST on importation. That appears to create a duplicate transfer: the entity would transfer the import GST under s19, and also include it in the net amount calculation under s14. However, note that s19 applies to “amounts that an untaxable Commonwealth entity is notionally liable to pay” on importation. The net amount already accounts for those amounts. The instrument does not explicitly say the net amount excludes import GST - it doesn’t. But s19(1) says “this section applies in relation to any of the following amounts” including GST on a taxable importation. Then s19(2) requires transfer. So the entity must transfer the import GST amount separately, but that same amount is also part of the GST component in s14. That could cause the same amount to be paid twice. Practitioners should examine whether the net amount formula is intended to exclude import GST? The language of s14: “GST is the sum of all the amounts of GST on taxable supplies for which the entity is notionally liable that are attributable to the tax period.” Wait, s14 definition says: “GST is the sum of all the amounts of GST on taxable supplies for which the entity is notionally liable that are attributable to the tax period.” That limits GST to “taxable supplies”, not importations. But s7 notional liability extends to both taxable supplies and taxable importations. The definition in s14 says “amounts of GST on taxable supplies”. It does not include import GST. So import GST is not in the net amount formula. That resolves the double counting. The separate section 19 handles import GST. That is the correct reading: GST on supplies only in net amount; GST on imports handled separately. Practitioners must be careful to distinguish supply GST from import GST for the net amount calculation.
Registration required. Some Commonwealth entities may not have previously registered for GST under the notional system. Section 12 mandates registration. Failure to register breaches the instrument and may also conflict with ATO expectations under the Commissioner’s general direction.
Commissioner’s offset power. Section 18 allows the Commissioner to offset a negative net amount against other notional debts, including PAYG withholding notional debts. An entity that expects a refund may instead have the amount redirected to cover other liabilities without prior notice, affecting its cash flow planning.
No interest or late payment penalties. While the instrument requires timely transfers, it does not impose interest for late payment. This may reduce the incentive for entities to prioritise notional transfers over other obligations. Conversely, the Commissioner has no express power to waive or defer transfers.
Transition pitfalls. The application provisions (sections 31-32) mean that for tax periods starting before 1 October 2025, the 2015 Direction continues to apply. Entities must maintain familiarity with both instruments during the transition. A net amount for a June 2025 tax period (with a 21‑day lodgement period in July) would still be under the old rules, even if the transfer occurs after 1 October. The instrument does not address mixed periods.