Background
1 Before me is an interlocutory application filed by the appellant ("Sanofi") in an appeal brought by Sanofi pursuant to s 60(4) of the Patents Act 1990 (Cth) ("the Act") from a decision of a delegate of the Commissioner of Patents ("the Delegate") directing that five applications for standard patents filed by the respondent ("Amgen") proceed to grant. By its interlocutory application, Sanofi seeks orders for discovery and leave to rely on experimental proof.
2 The five oppositions were heard by the Delegate in June 2019. Senior Counsel for Sanofi, Mr Shavin KC, also appeared before the Delegate as did Senior Counsel for Amgen, Mr Dimitriadis SC. The Delegate's decision is dated 26 September 2022.
3 Under the relevant transitional provisions, the oppositions to the applications are to be determined by reference to the provisions of the Act before amendment by the Intellectual Property Laws Amendment (Raising the Bar) Act 2012 (Cth) ("RTB Act"). It is common ground that the test to be applied for the purpose of determining whether or not the applications should proceed to grant is whether Sanofi has established that any claim, if it were the subject of a grant, would be clearly invalid or whether, as the test is sometimes expressed, it would be practically certain that any such claim would be invalid.
4 An appeal under s 60(4) is a hearing de novo in the original jurisdiction of the Court. The onus of proving facts which are relied on to make out a ground of opposition is on the opponent. The rules of evidence, including, in particular, relevant provisions of the Evidence Act 1995 (Cth), apply at the hearing of the appeal. Sections 37M-37P of the Federal Court of Australia Act 1976 (Cth) also apply to the proceeding. Section 37M(1) provides:
The overarching purpose of the civil practice and procedure provisions is to facilitate the just resolution of disputes:
(a) according to law; and
(b) as quickly, inexpensively and efficiently as possible.
5 There is a significant public interest in ensuring that patents that are invalid are not granted. But there is also a significant public interest in ensuring that opposition proceedings are not used improperly to delay the grant of a patent. These considerations were referred to by the Full Court in Genetics Institute Inc v Kirin-Amgen Inc (1999) 92 FCR 106 (Black CJ, Merkel and Goldberg JJ). The Court also stated at [19] "… the purpose of pre-grant opposition proceedings is to provide a swift and economical means of settling disputes that would otherwise need to be dealt with by the courts in more expensive and time-consuming post-grant litigation; that is, to decrease the occasion for costly revocation proceedings by ensuring that bad patents do not proceed to grant …".
6 Each of the patent applications is a divisional application of a parent application filed in 2008. Each is entitled "Antigen Binding Proteins to Proprotein Convertase Subtilisin Kexin Type 9" ("PCSK9"). For convenience, I will refer to the five patent applications as the 677, the 685, the 689, the 748 and the 751 applications.
7 The 677 application has 42 claims including two independent claims. The 185, 689 and 748 application have 30 claims, with only one independent claim. The 751 application has 42 claims including four independent claims.
8 The Delegate noted that the specification for the five applications were essentially the same save for consistory statements and some minor differences in text and figures. She used the 677 application as the exemplar specification.
9 Claim 1 of the 677 application (an example of a "binding claim") is to:
An isolated monoclonal antibody that binds an epitope on hPCSK9 comprising one or more of amino acid residues 207, 208, 162, 164, 167, or 123 of SEQ ID NO: 1, and wherein the monoclonal antibody blocks binding of PCSK9 to LDLR.
10 Claim 1 of the 748 application (an example of a "competition claim") is to:
An isolated monoclonal antibody that binds to human PCSK9 and is neutralizing in that an excess of said antibody reduces the quantity of human PCSK9 bound to LDLR in an in vitro competitive binding assay, wherein said monoclonal antibody competes for binding to PCSK9 with an antibody that comprises: a heavy chain variable region of the amino acid sequence in SEQ ID NO: 49; and a light chain variable region of the amino acid sequence in SEQ ID NO: 23.
11 The evidence relied on by Sanofi at the hearing of the interlocutory application included affidavit evidence from its solicitors, Mr Anthony Muratore and Ms Lisa Taliadoros, both of whom are experienced practitioners well versed in the conduct of patent proceedings in this Court involving pharmaceutical patents. Affidavit evidence for Amgen was given by its solicitor, Mr Gary Cox, who is also an experienced practitioner who has acted in patent proceedings in this Court including those involving pharmaceutical patents.
12 In her first affidavit, Ms Taliadoros identifies the issues in the proceeding and the matters relevant to Sanofi's oppositions. According to para 11 of her first affidavit, the various claims fall into two broad categories:
(a) Epitope/Residue Claims (677, 689 and 751 Applications), being claims to an isolated monoclonal antibody that:
(i) either binds to at least one of the nominated residues of PCSK9, or binds (or "recognizes") an epitope comprising one or more nominated residues of PCSK9; and
(ii) either "blocks" binding of PCSK9 to LDLR, or "reduces" binding between PCSK9 and (an) EGFa domain of LDLR.
(b) Competition Claims (685 and 748 Applications), being claims to an isolated monoclonal antibody that:
(i) binds to human PCSK9;
(ii) is "neutralizing" in that an excess of said antibody "reduces" the quantity of human PCSK9 bound to LDLR in an in vitro competitive binding assay, or "reduces" binding between human PCSK9 and an EGFa domain of LDLR; and
(iii) "competes" for binding to PCSK9 with a nominated 'reference antibody'.
13 Sanofi alleges that each of the claims of Amgen's applications is invalid on the basis that the invention as claimed is not a manner of manufacture, lacks fair basis, is not fully described (including best method), is not sufficiently defined, lacks clarity, lacks utility, lacks novelty, and does not involve an inventive step.
14 Sanofi contends that even if the patent applications disclose two monoclonal antibodies (21B12 and 31H4) that binds to an epitope of PCSK9 and blocks or reduces binding between the antigen PCSK9 and LDLR, the claims of each of the applications has been drafted far more widely than is legally permissible. Sanofi contends that the claims are of such breadth that they claim, in effect, a monopoly over any antibody that happens to interact with PCSK9, regardless of the antibody's amino acid sequence or 3D structure, and irrespective of whether the claimed antibody has the desired biological outcome of lowering plasma LDL levels (ie. "bad cholesterol"). Sanofi also contends that, through the use of very broad definitions for terms including "neutralize" and "compete" in the 685 and 748 applications, Amgen has sought to extend the scope of its claims to antibodies that "modulate" the activity of PCSK9 in any way whatsoever (in the case of "neutralize") and to antibodies that occupy any physical space that is proximal or even remote to the spaces to be occupied by either of the two antibodies described in the patent applications (in the case of "competes").
15 In para 13 of her first affidavit, Ms Taliadoros identifies 14 matters relevant to Sanofi's opposition all of which appear to have been drawn from written submissions relied on by Sanofi before the Delegate. I will refer to four of those matters (a, d, f and k) by way of example:
a. The claims are of such a breadth that they claim in effect a monopoly over any antibody that happens to interact with PCSK9, regardless of the antibody's amino acid sequence or 3D structure and irrespective of whether the claimed antibody has the desired biological outcome of lowering plasma LDL levels …
d. Having an amino acid sequence of an antibody in hand does not of itself enable one to know (or predict) the 3D structure of the antibody, let alone the antigen to which it will bind (and where on the antigen it will bind and with what affinity). Equally, the identification of a useful function for a (hypothetical) antibody does not enable one to know (or predict) the amino acid sequence of such an antibody …
f. Knowledge of the structure the 3D structure of the antigen (even knowledge of the epitopes or residues on PCSK9 to which the antibody binds) does not assist the skilled reader in identifying the amino acid sequence of that antibody or in obtaining an antibody that will have the necessary concomitant structure. Nor is there any correlation between where an antibody binds and its amino acid sequence. In addition, a change made to a single amino acid, for example in a CDR, may so severely impact binding that it may be lost altogether because of the impact on 3D configuration …
k. There is no reasonable scientific basis to extrapolate from 21B12 and 31H4 to the wider classes of antibodies being the subject matter claimed …
16 Each of the matters referred to in para 13 of Ms Taliadoros' first affidavit concerns the type of issue or question that is almost invariably the subject of independent expert evidence. This was the approach taken by Sanofi in the proceeding before the Delegate whose reasons for decision identify the declarations relied on by Sanofi's own experts in the fields of monoclonal antibodies and structural biology.